FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13745667
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT61650.028.960634
AGTGGTA63150.028.7281135
AGCAGTG92150.019.6123392
GTGGTAT95050.019.0860356
TGGTATC102800.017.7872127
GGTATCA107600.017.462068
GCAGTGG109500.016.701173
GTATCAA114200.016.1376829
AAGCAGT127150.014.6645051
CCCTAGT4703.542178E-55.51498985-89
Produced by FastQC (version 0.11.5)