FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182364

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182364
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13803641
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT75150.012.5563634
AGTGGTA87850.010.8179375
AGCAGTG103450.09.4702842
GCAGTGG112050.08.4862663
GTGGTAT121000.07.91319376
TGGTATC145250.06.59205777
AAGCAGT149500.06.46957161
GGTATCA157100.06.2322988
GTATCAA166000.05.72468239
Produced by FastQC (version 0.11.5)