FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15586775
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTATA58400.07.3961099
AACACTA62250.07.16996867
ACACTAT69150.06.1422128
AAACACT89250.05.40420156
ACCAAAC105500.05.2589163
CAAACAC102650.05.11958075
CCAAACA113750.05.00243764
Produced by FastQC (version 0.11.5)