FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15928041
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT100250.033.1800354
AGTGGTA103500.032.2772755
AGCAGTG126050.026.6751522
GTGGTAT137300.024.1216246
GCAGTGG152350.021.9750423
GTATCAA154050.021.9669139
TGGTATC167000.020.0904057
GGTATCA171350.019.623018
AAGCAGT181850.018.8818841
TCTTGGG111250.06.3941235-39
CAACGCA122750.06.21751310-14
GCAGAGT130600.05.601036515-19
AACGCAG149600.05.15935610-14
Produced by FastQC (version 0.11.5)