FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14678926
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT75600.033.2335934
AGTGGTA75550.032.2069785
GTGGTAT101350.024.646786
AGCAGTG108950.023.0645962
GGTATCA111750.022.353038
GTATCAA111250.022.3240789
TGGTATC113350.021.9739977
AAGCAGT140200.018.5054421
GCAGTGG134100.018.4153063
TCTTGGG84600.06.075971635-39
GCAGAGT96350.05.79791115-19
CTAGAGG8801.4551915E-115.5645742110-114
CAACGCA105700.05.35305910-14
TATCAAC110600.05.246073210-14
Produced by FastQC (version 0.11.5)