FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14833798
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT25950.011.7214531
TAGCATG26350.010.10899458
GTGAGTA33600.09.2208382
TAACCCC37050.07.57815079
GAGTATA67800.05.4156894
CTAGATC8252.4938345E-95.2364593135-139
Produced by FastQC (version 0.11.5)