FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13704521
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA53050.016.826697
ACACTAT54400.016.5414498
CACTATA55700.015.8979989
AAACACT80800.011.1381186
CAAACAC83800.010.3123995
ACCAAAC88000.06.30420543
TATTTAG83600.06.2865039
CCCTTAT97000.05.79089075
CCAAACA94750.05.39889144
CCTTATT118100.05.0598936
TACCCCT48502.237357E-105.05136352
TATCCCT104300.05.04324442
Produced by FastQC (version 0.11.5)