FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16700134
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGGGG44150.015.9788399
AGTGAGT51400.015.6414681
GTGAGTA52750.014.612812
ATAAGGG98950.07.7842698
TGAGTAT121800.07.156473
GAGTATA126050.06.91091064
GTATAAG133000.06.44086076
CTAGGAG27750.06.43382550-54
TTCTAGG28650.06.33222750-54
AGCATGA181000.05.48845779
CCTTCAG203650.05.19667674
TATAAGG145550.05.09417157
Produced by FastQC (version 0.11.5)