FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14790205
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACCCTA24450.013.5453534
CCCTAAG25100.012.6204296
ACCCTAA27200.012.440365
CTAAGAG28350.011.9355638
CCTAAGA36000.09.1992097
GTACCCT50000.06.76831053
TGTACCC60450.06.43551732
GGACTAA21957.398096E-55.57956552
GTGTACC64200.05.5317341
GTCCCTA25251.9137846E-55.4180713
TAAGAGC68150.05.17635359
Produced by FastQC (version 0.11.5)