FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15322358
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGAC5400.09.064671130-134
CTAGACC6300.07.998239130-134
CCACTCA34600.07.69770249
TCTAGCT8600.06.86425945-49
ATCCTAG7150.06.846086125-129
CTAGCTC7600.06.441301345-49
TCCTAGA9450.05.7892356125-129
Produced by FastQC (version 0.11.5)