FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182539

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182539
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15322358
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA32350.08.2343239
CCTAGAC7600.06.630665130-134
TCTAGCT8050.06.61811545-49
ATCCTAG8500.06.4367476125-129
CTAGACC8200.06.32108130-134
CTAGCTC9250.06.226538745-49
TCCTAGA10301.8189894E-125.311879125-129
Produced by FastQC (version 0.11.5)