FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13846234
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA72600.027.1700485
CAGTGGT81600.024.2617514
AGCAGTG110550.018.1976642
GTGGTAT110100.017.9159436
GTATCAA131000.015.7721829
GCAGTGG130300.015.4701033
GGTATCA141500.014.398618
TGGTATC144750.014.0747657
AAGCAGT154850.013.0816661
CTAGATC8100.06.7554793140-144
GATCGGA137350.06.42609831
AGAGCAC148200.05.78081858
GAGCACA156000.05.58395539
TCGGAAG172750.05.1675333
Produced by FastQC (version 0.11.5)