FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13846234
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA107000.012.9167487
CTCAAAC113000.012.0397949
ATGGCTC125200.010.693915
TGGCTCA136050.010.1585246
GCTCAAA152750.09.0951918
CCTCTAG11950.09.03721750-54
CTCTAGG9100.08.54463850-54
TCTGATG166450.08.2317021
GATGGCT185850.07.4364654
TCTAGGA11200.06.81395450-54
GATCGGA141800.06.545681
CTGATGG242400.06.35584552
CTAGGAT14850.05.720933450-54
CTCGGGT53400.05.55467320-24
TGATGGC304900.05.5245353
CTAGCAC9205.0931703E-115.3214850-54
TCGGAAG175050.05.2225053
Produced by FastQC (version 0.11.5)