FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16810838
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA84900.029.0832445
CAGTGGT88850.027.5478024
AGCAGTG120150.021.304852
GTGGTAT127550.019.6405626
GTATCAA141500.017.958859
GCAGTGG141400.017.768123
GGTATCA162050.016.1259148
TGGTATC165300.015.45994957
AAGCAGT165150.015.3318381
TCTTGGG98000.05.641856735-39
Produced by FastQC (version 0.11.5)