FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17685858
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA95250.017.6101475
CAGTGGT96100.017.4552274
AGCAGTG133300.012.8564052
GTGGTAT133200.012.8086316
TGGTATC151100.012.1488267
GGTATCA162800.011.0988488
GTATCAA168600.010.7597349
GCAGTGG164050.010.7088033
AAGCAGT178700.09.8684991
Produced by FastQC (version 0.11.5)