FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182608

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182608
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19476105
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA91750.034.1302035
CAGTGGT98250.031.3704514
GTGGTAT137150.023.0947116
AGCAGTG140700.022.587762
GTATCAA151000.021.5486729
GGTATCA167950.019.2453298
TGGTATC167600.019.1996657
GCAGTGG172500.018.1730923
AAGCAGT185200.017.5369641
TCTTGGG119650.05.41514735-39
GCAGAGT130100.05.3339215-19
Produced by FastQC (version 0.11.5)