Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005182622 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10935837 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CAGTGGT | 6190 | 0.0 | 28.958515 | 4 |
AGCAGTG | 7630 | 0.0 | 24.379818 | 2 |
AGTGGTA | 8235 | 0.0 | 22.291342 | 5 |
GCAGTGG | 8835 | 0.0 | 20.77788 | 3 |
GTGGTAT | 10610 | 0.0 | 17.437225 | 6 |
TGGTATC | 12215 | 0.0 | 15.0281105 | 7 |
AAGCAGT | 12080 | 0.0 | 14.970582 | 1 |
GGTATCA | 15055 | 0.0 | 13.150232 | 8 |
GTATCAA | 15580 | 0.0 | 12.660668 | 9 |
CGCAGAG | 7025 | 0.0 | 5.8819385 | 15-19 |
GCAGAGT | 7155 | 0.0 | 5.7951913 | 15-19 |
AACGCAG | 8505 | 0.0 | 5.061784 | 10-14 |