FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16913882
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT111600.029.9311354
AGCAGTG136050.025.1229922
AGTGGTA136250.024.8326475
GCAGTGG138700.024.4982433
GTGGTAT187100.018.006586
AAGCAGT216200.016.0969281
GTATCAA237400.014.8592769
GGTATCA233200.014.8183148
TGGTATC232200.014.7881997
TCTTGGG115850.06.351001735-39
TACCTAG18553.6899786E-56.24064871
AACGCAG129850.05.932341610-14
GCAGAGT130900.05.796406315-19
CAACGCA135950.05.740297310-14
CGCAGAG141650.05.56995715-19
TCAACGC144850.05.48699910-14
ACGCAGA149850.05.26516115-19
Produced by FastQC (version 0.11.5)