FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16913882
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA121650.019.1717727
CTCAAAC147550.016.001629
GCTCAAA172250.013.91599758
TGGCTCA165150.013.8165546
ATGGCTC169650.013.7895015
TCTGATG229500.010.1772331
CTCGGGT48300.09.83791820-24
GATGGCT242100.09.8115634
CTGATGG280100.08.4817982
CCTCTAG20000.08.27965850-54
CCTCGGG59850.07.98748920-24
TGATGGC330250.07.585293
GGGTGGG70350.06.93815425-29
CTCTAGG19550.06.628883450-54
GGTCCTC76400.06.38815145-49
TCTAGGA24450.05.94822150-54
ACACAGC95500.05.65432410-14
AGGTCCT87600.05.58783645-49
CACAGCG98200.05.498306315-19
GGTGGGA98500.05.33537625-29
Produced by FastQC (version 0.11.5)