FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18768393
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA58650.016.8169069
GCCACTC76250.013.122958
AAGCCAC109000.09.1124966
AGCCACT116550.08.7074627
ACACTAT60900.07.21056138
AACACTA63050.06.96353157
TACAAAG164200.06.6214652
ACAAAGC181800.06.33505253
CTCACTA34750.06.256215615-19
ATACAAA203950.06.06932351
CACTATA72000.05.9994629
CCGTTAA65750.05.5833984
AAAGCCA209950.05.41706665
Produced by FastQC (version 0.11.5)