FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14214559
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT77850.026.7242034
AGTGGTA97950.021.974945
AGCAGTG108800.019.616752
GCAGTGG113050.018.9762863
GTGGTAT131650.016.2950176
TGGTATC154650.014.2439667
AAGCAGT154750.013.511241
GGTATCA178200.012.4026088
GTATCAA183800.012.0635569
GGGTGGG69550.05.5983612
AACACTA52800.05.3172877
GCAGAGT100000.05.11102515-19