FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16871969
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA98050.021.440125
CAGTGGT104650.020.2276944
AGCAGTG132200.016.083752
GTGGTAT136400.015.57020956
GCAGTGG150650.013.9226093
TGGTATC169450.012.6185877
GTATCAA187750.012.0788749
AAGCAGT189450.011.693171
GGTATCA193850.011.2531138
CTAGACC11050.05.864178120-124
Produced by FastQC (version 0.11.5)