FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15202253
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT86850.028.0162374
AGTGGTA104000.023.9500875
AGCAGTG125250.019.349492
GCAGTGG135050.018.2311063
GTGGTAT136900.018.193836
TGGTATC158400.015.9061257
AAGCAGT162100.014.9806961
GGTATCA169550.014.9025588
GTATCAA177500.014.3162039
GCAGAGT101650.05.42483615-19
TCTTGGG102950.05.21705835-39
Produced by FastQC (version 0.11.5)