FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13417993
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT81600.026.382354
AGTGGTA89350.023.7716855
AGCAGTG102250.020.9838642
GCAGTGG110750.019.1133173
GTGGTAT119400.018.030156
TGGTATC137750.015.4715067
AAGCAGT144950.015.0507071
GGTATCA145450.014.7019598
GTATCAA159950.013.8643329
GCAGAGT92400.05.20519515-19
TCTTGGG96000.05.1335-39
Produced by FastQC (version 0.11.5)