FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16744877
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA71550.017.9095955
CAGTGGT78900.016.5190334
GTGGTAT103150.012.4229916
GTATCAA108550.012.2693029
AGCAGTG117800.011.4404732
TGGTATC125450.010.3294517
GGTATCA127450.09.9979018
AAGCAGT145000.09.57175351
GCAGTGG151900.08.6349793
Produced by FastQC (version 0.11.5)