FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16744877
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAC119050.010.2799499
TGGCTCA119950.09.2425246
GGCTCAA123600.09.2025617
ATGGCTC118100.09.0825225
CCTCTAG8150.08.12873750-54
TCTGATG124150.08.1115541
GATGGCT163850.06.98531154
CTCTAGG7450.06.959357350-54
GCTCAAA181300.06.9480218
TCTAGGA9500.05.76080150-54
CTAGGAT9650.05.67125550-54
Produced by FastQC (version 0.11.5)