FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16086503
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA72150.019.3574185
CAGTGGT72450.019.1783714
GTATCAA101800.014.2140169
GTGGTAT108650.013.1853566
AGCAGTG113850.012.8390072
GGTATCA119050.012.33585558
TGGTATC124200.011.53453357
AAGCAGT143800.010.8062571
GCAGTGG146200.09.6526393
Produced by FastQC (version 0.11.5)