FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16086503
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGG6950.012.84429550-54
CCTCTAG9050.011.93207750-54
ATGGCTC105400.011.2020545
TCTAGGA7700.011.03226450-54
CTCAAAC113200.010.8115729
GGCTCAA116700.010.6108947
TGGCTCA112150.010.5278336
CTAGGAT9450.09.59869450-54
TCTGATG119200.09.5300021
GATGGCT153950.07.95020774
GCTCAAA168950.07.3718128
TTAAGAC28301.7751518E-86.105513
Produced by FastQC (version 0.11.5)