Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005182744 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14883731 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGTGGTA | 8785 | 0.0 | 31.05813 | 5 |
CAGTGGT | 8950 | 0.0 | 30.324574 | 4 |
AGCAGTG | 12675 | 0.0 | 21.79822 | 2 |
GTGGTAT | 13135 | 0.0 | 21.319569 | 6 |
GTATCAA | 14485 | 0.0 | 19.183493 | 9 |
GCAGTGG | 14240 | 0.0 | 19.009674 | 3 |
GGTATCA | 15335 | 0.0 | 17.979345 | 8 |
TGGTATC | 15700 | 0.0 | 17.790617 | 7 |
AAGCAGT | 16500 | 0.0 | 17.09462 | 1 |
TCTTGGG | 9725 | 0.0 | 5.9816365 | 35-39 |
GCAGAGT | 11055 | 0.0 | 5.457086 | 15-19 |
CAACGCA | 12115 | 0.0 | 5.3478494 | 10-14 |