FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12040511
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT60950.020.669434
AGTGGTA73700.016.7031425
AGCAGTG79750.016.5511972
GCAGTGG100500.012.8222363
GTGGTAT100350.012.6973956
TGGTATC111150.012.0465377
GGTATCA122500.011.4005148
AAGCAGT121650.011.263291
GTATCAA132100.010.4630229
ACGTTAA29001.1201882E-65.461214
Produced by FastQC (version 0.11.5)