FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16950444
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG57050.010.4738328
GTGAGTA55150.08.7568582
AGTGAGT61350.08.2538391
TAACCCC57550.08.1311369
CCTTTAG94750.06.53485164
CACTCAC52950.06.26196862
TTAGCAT116550.05.7445217
CTGTGAG55750.05.5595882
TGTGAGA57100.05.55437953
GTGTGAG41653.1959644E-95.18548549
ACTCACC66800.05.17945153
Produced by FastQC (version 0.11.5)