FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16950444
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG55550.09.9781598
GTGAGTA56650.09.1517572
AGTGAGT62200.08.8463421
TAACCCC59350.08.73387059
CCTTTAG95250.06.80147844
ATAACCC102600.05.12176048
GAGTATA121800.05.0824954
Produced by FastQC (version 0.11.5)