FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18783686
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA81250.022.4167655
CAGTGGT83850.021.464564
GTGGTAT115650.015.872956
AGCAGTG126800.014.8778022
TGGTATC128100.014.0492777
GTATCAA134500.013.8624699
GGTATCA140600.013.4658428
GCAGTGG150400.012.1593483
AAGCAGT157800.012.0454411
Produced by FastQC (version 0.11.5)