FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14836754
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA64600.023.6249245
CAGTGGT63850.023.3393234
GTGGTAT90150.017.408366
AGCAGTG101100.015.8339082
GTATCAA101100.015.6655069
GGTATCA107650.014.7128318
TGGTATC110500.014.4629797
GCAGTGG125800.012.2464993
AAGCAGT145350.011.2492041
Produced by FastQC (version 0.11.5)