FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17612817
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA134250.012.4395556
CTCAAAC139400.012.1863669
TCTGATG134100.012.03070451
ATGGCTC142950.011.5314125
GGCTCAA148500.011.2457017
GATGGCT185850.09.6055074
GCTCAAA178950.09.5332648
CCTCTAG15700.07.97901650-54
CACACTA32350.07.78787147
CTCTAGG10850.07.69711550-54
CTGATGG232750.07.2070752
CTAGGAT14200.06.286849550-54
TGATGGC308200.06.0727853
TCTAGGA16450.06.039665750-54
CTAGCAC9950.05.64379550-54
CTCGGGT62100.05.634613520-24
Produced by FastQC (version 0.11.5)