Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005182782 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15785358 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CAGTGGT | 9055 | 0.0 | 36.333298 | 4 |
AGTGGTA | 9590 | 0.0 | 34.456497 | 5 |
AGCAGTG | 12015 | 0.0 | 27.857021 | 2 |
GTGGTAT | 13475 | 0.0 | 24.9489 | 6 |
GCAGTGG | 13425 | 0.0 | 24.561083 | 3 |
GTATCAA | 15880 | 0.0 | 21.306429 | 9 |
TGGTATC | 16255 | 0.0 | 20.460596 | 7 |
GGTATCA | 17100 | 0.0 | 19.660025 | 8 |
AAGCAGT | 18010 | 0.0 | 18.75811 | 1 |
TCTTGGG | 10925 | 0.0 | 6.3657775 | 35-39 |
CAACGCA | 13445 | 0.0 | 5.686289 | 10-14 |
GCAGAGT | 13910 | 0.0 | 5.423915 | 15-19 |
AACGCAG | 15645 | 0.0 | 5.0339274 | 10-14 |