FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182784

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182784
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14121299
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT74800.033.4918944
AGTGGTA81250.030.9217555
AGCAGTG104550.024.7676732
GTGGTAT105700.024.1094476
TGGTATC122800.021.0452987
GTATCAA124950.020.8560129
GCAGTGG126350.020.5692583
GGTATCA140250.018.940118
AAGCAGT151900.017.7099481
CCACTCA41700.08.6316329
TCTTGGG91700.06.155241535-39
GCAGAGT104800.05.52293215-19
GCCACTC75500.05.0534498
Produced by FastQC (version 0.11.5)