FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15723177
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA95050.033.2540785
CAGTGGT120950.026.4307584
GTGGTAT139700.022.8317816
AGCAGTG149700.021.8837662
GTATCAA148650.021.6508589
AAGCAGT170600.019.2028141
TGGTATC169700.019.007667
GGTATCA170550.018.8707128
GCAGTGG178350.017.9646763
TCTTGGG90700.07.303197435-39
GCAGAGT132700.05.38236615-19
Produced by FastQC (version 0.11.5)