FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10736367
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA85700.014.6992377
ATGGCTC93250.013.972415
CTCAAAC97350.013.5317129
TGGCTCA100400.012.8339676
GATGGCT124850.010.8971994
CCTCTAG8700.010.75803450-54
TCTGATG119600.010.7141711
CTCTAGG7700.010.0981550-54
GCTCAAA134300.09.8087278
CTGATGG172650.07.6725442
TGATGGC199900.07.5624463
CTCGGGT38050.07.07657820-24
TCTAGGA10750.06.563362650-54
CTAGGAT11750.06.004778450-54
GGTCCTC57600.05.298955445-49
GGGTGGG56900.05.01034825-29
Produced by FastQC (version 0.11.5)