FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15289006
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA132950.017.8137029
AGAGCAC141450.016.5905698
GATCGGA145850.016.4328251
TCGGAAG217850.011.3442393
ATCGGAA225450.011.217492
AAGAGCA228550.010.677397
GAAGAGC283450.08.7363216
GGAAGAG292200.08.6225255
CGGAAGA342700.07.2114114
AGTCACA66750.06.49331225-29
CAGTCAC86900.05.584203225-29
CCAGTCA99250.05.223036325-29
CACGTCT101800.05.119663710-14
CACACGT97050.05.11804610-14
Produced by FastQC (version 0.11.5)