FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18268661
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA137150.014.9425547
CTCAAAC150850.014.0619829
ATGGCTC169300.012.147215
CTAGCGT13550.011.99313890-94
TGGCTCA177750.011.650886
GCTCAAA192900.010.9593848
TCTGATG193150.010.5504281
GCTAGCG16100.010.00685-89
GATGGCT227050.09.1525874
CCTAAAA91550.08.9036171
TGCTAGC18650.08.71501285-89
CCTCTAG15800.08.46545850-54
CTGATGG289150.07.41102742
CTCGGGT63800.06.920156520-24
ATGCTAG24750.06.625184585-89
CTCTAGG14650.06.57751350-54
TGATGGC351600.06.4012233
AATTCTC147800.06.0814438
TTAGGGG31200.05.809461660-64
TAGGGGG34200.05.173672760-64
Produced by FastQC (version 0.11.5)