FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17957622
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT45500.07.99773741
ATAATTC146800.07.3064674
TAACCCC50150.07.1771959
GTGAGTA52400.06.4613712
TAATTCA98600.05.40271045
Produced by FastQC (version 0.11.5)