FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14974768
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTAATC24000.08.3997196
CGACTAA20952.5465852E-118.2479344
CATTTAG32100.07.40206673
GACTAAT26105.820766E-117.17217455
CTAATCT32201.8189894E-106.2605357
GTGAGTG46350.06.0602761
CGACTAG6301.689441E-75.485571445-49
TAATCTA44259.276846E-115.3692058
TGAGTGA59350.05.33843232
Produced by FastQC (version 0.11.5)