FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14810711
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA117050.018.1417587
TGGCTCA124800.017.1302936
ATGGCTC133250.016.3139175
CTCAAAC140250.015.9621259
TCTGATG146150.015.1312891
GATGGCT172900.013.0722474
GCTCAAA175350.012.5615848
CTGATGG233050.09.3280532
TGATGGC266850.08.9289983
CCTCTAG18750.07.9851250-54
CTCGGGT56000.07.918236720-24
AACACTA50200.07.02621037
CTCTAGG14200.06.995361350-54
CACTATA49200.06.73016839
CTAGCAC9750.06.20146250-54
ACACTAT55400.05.71704638
GGTCCTC85000.05.57220345-49
AACACAG89550.05.546661410-14
TCTAGGA20500.05.477597750-54
AGGTCCT87500.05.4294545-49
Produced by FastQC (version 0.11.5)