FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16313821
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA89350.032.468795
CAGTGGT95000.030.6894914
AGCAGTG122850.024.5392592
GTGGTAT126000.023.0816276
GCAGTGG147200.020.1487273
GTATCAA155450.019.452269
TGGTATC154250.019.1835127
GGTATCA158500.018.80548
AAGCAGT178900.017.2818181
TCTTGGG110200.05.513607535-39
GCAGAGT120250.05.471978715-19
Produced by FastQC (version 0.11.5)