FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14865408
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA122550.010.0439487
CTCAAAC155600.08.2344039
ATGGCTC159450.07.71952065
GCTCAAA175150.07.31528958
AGCTAAC36600.06.49010376
TGGCTCA185550.06.3621176
TCTGATG182100.06.23050451
GCTAACC43550.05.9502617
GATGGCT223800.05.8536954
CTAACCA41952.0008883E-115.6624418
TCTCCTA64400.05.5886368
CCTCTAG15750.05.39399150-54
CTGATGG257400.05.1180922
Produced by FastQC (version 0.11.5)