FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183190

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183190
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13023467
Sequences flagged as poor quality0
Sequence length150
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA58800.031.5879965
CAGTGGT65100.028.8628524
GTATCAA80600.023.3123029
GTGGTAT90950.020.6593116
AGCAGTG96600.019.7505172
TGGTATC95250.019.651087
GGTATCA98050.019.0899058
AAGCAGT105350.018.5201471
GCAGTGG117100.016.3543933
GCAGAGT77850.05.474470615-19
Produced by FastQC (version 0.11.5)