FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11816012
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT67450.026.2554
AGTGGTA76750.022.979435
AGCAGTG91400.020.040472
GCAGTGG99650.018.0603893
GTGGTAT105250.017.577726
TGGTATC120900.015.0070597
GGTATCA123700.014.7837768
AAGCAGT128850.014.6102651
GTATCAA131200.014.2679269
TAGCATG23202.8867424E-55.5860648
TCTTGGG73800.05.482197335-39
GCAGAGT80300.05.002563515-19
Produced by FastQC (version 0.11.5)