FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16369236
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA118900.021.678727
CTCAAAC130750.020.2646279
TGGCTCA128450.020.235116
ATGGCTC135500.018.8634685
TCTGATG149350.017.1141621
GCTCAAA161400.016.1486998
GATGGCT191600.013.6784964
CCTCTAG14300.011.5804250-54
CTGATGG263650.010.0496862
TGATGGC286850.09.7137873
CTCTAGG12350.09.44453450-54
TCTAGGA14150.08.5484150-54
CTCGGGT62450.08.39327420-24
CTAGGAT15700.08.07133850-54
AACACAG95500.06.332984410-14
GGGTGGG98950.05.80656925-29
CTAGCAC10200.05.647058550-54
ACACAGC109200.05.45934110-14
AGGTCCT103900.05.43291645-49
GGTGGGA114800.05.243205525-29
Produced by FastQC (version 0.11.5)