FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005183200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005183200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13271876
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT83750.034.812934
AGTGGTA103150.028.544745
AGCAGTG106150.027.7234632
GCAGTGG120900.023.7589263
GTGGTAT134450.021.845156
TGGTATC147800.020.359057
AAGCAGT152300.019.323381
GGTATCA169000.018.2736918
GTATCAA174900.017.0398679
GCAGAGT96700.06.53638815-19
TCTTGGG101150.06.13545535-39
CGCAGAG113450.05.67286915-19
AACGCAG115800.05.657038710-14
CAACGCA121500.05.59309310-14
ACGCAGA128450.05.144916515-19
Produced by FastQC (version 0.11.5)